Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TraipQ8VIG6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TraipQ8VIG6 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.7■□□□□ 0.26
TraipQ8VIG6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TraipQ8VIG6 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.69■□□□□ 0.26
TraipQ8VIG6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.69■□□□□ 0.26
TraipQ8VIG6 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.69■□□□□ 0.26
TraipQ8VIG6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TraipQ8VIG6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.68■□□□□ 0.26
TraipQ8VIG6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Gm6736-201ENSMUST00000166583 948 ntBASIC16.68■□□□□ 0.26
TraipQ8VIG6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.68■□□□□ 0.26
TraipQ8VIG6 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TraipQ8VIG6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.67■□□□□ 0.26
TraipQ8VIG6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Gm24513-201ENSMUST00000174964 138 ntBASIC16.67■□□□□ 0.26
TraipQ8VIG6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.67■□□□□ 0.26
TraipQ8VIG6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms