Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Gm9385-201ENSMUST00000117563 472 ntBASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cspg4Q8VHY0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Cspg4Q8VHY0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Gm25287-201ENSMUST00000103846 110 ntBASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Gm22918-201ENSMUST00000103855 110 ntBASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cspg4Q8VHY0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Gm27989-201ENSMUST00000184721 107 ntBASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cspg4Q8VHY0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cspg4Q8VHY0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.46□□□□□ -0.26
Cspg4Q8VHY0 Mir3102-201ENSMUST00000175555 104 ntBASIC13.46□□□□□ -0.26
Cspg4Q8VHY0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Cspg4Q8VHY0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Cspg4Q8VHY0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cspg4Q8VHY0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cspg4Q8VHY0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms