Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Gm2274-201ENSMUST00000184539 609 ntBASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Gm11539-201ENSMUST00000119837 557 ntBASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh18Q8VHR0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh18Q8VHR0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Pcdh18Q8VHR0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh18Q8VHR0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Pcdh18Q8VHR0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Gm13186-201ENSMUST00000118031 316 ntBASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Gm13474-201ENSMUST00000122466 815 ntBASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Gm37055-201ENSMUST00000191866 133 ntBASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh18Q8VHR0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Actl10-202ENSMUST00000226583 1501 ntBASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms