Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rab40cQ8VHQ4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Gm10812-201ENSMUST00000099864 546 ntBASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rab40cQ8VHQ4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rab40cQ8VHQ4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms