Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Gm12350-201ENSMUST00000121208 462 ntBASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ndc1Q8VCB1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ndc1Q8VCB1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ndc1Q8VCB1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ndc1Q8VCB1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ndc1Q8VCB1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ndc1Q8VCB1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ndc1Q8VCB1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Gm1401-201ENSMUST00000122048 772 ntBASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Gm7230-201ENSMUST00000173026 815 ntBASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ndc1Q8VCB1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Mir5126-201ENSMUST00000175513 77 ntBASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Gm27525-201ENSMUST00000184465 107 ntBASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ndc1Q8VCB1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms