Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Nup35Q8R4R6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Gm13474-201ENSMUST00000122466 815 ntBASIC12.87□□□□□ -0.35
Nup35Q8R4R6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup35Q8R4R6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Gm10566-201ENSMUST00000086739 996 ntBASIC12.86□□□□□ -0.35
Nup35Q8R4R6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Nup35Q8R4R6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Gm7213-201ENSMUST00000215977 950 ntBASIC12.85□□□□□ -0.35
Nup35Q8R4R6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup35Q8R4R6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.84□□□□□ -0.35
Nup35Q8R4R6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms