Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Gm7222-201ENSMUST00000117512 906 ntBASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpp40Q8R1F9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpp40Q8R1F9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpp40Q8R1F9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpp40Q8R1F9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.83■□□□□ 0.29
Rpp40Q8R1F9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpp40Q8R1F9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Gm5682-201ENSMUST00000173402 505 ntBASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 AV026068-213ENSMUST00000223675 1171 ntBASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpp40Q8R1F9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Rpp40Q8R1F9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpp40Q8R1F9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rpp40Q8R1F9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms