Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atf7Q8R0S1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atf7Q8R0S1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Atf7Q8R0S1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atf7Q8R0S1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atf7Q8R0S1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Asic1-205ENSMUST00000228185 1818 ntBASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Atf7Q8R0S1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Gm12497-201ENSMUST00000138778 237 ntBASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Ank2-226ENSMUST00000189368 339 ntBASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Gm7506-201ENSMUST00000207758 815 ntBASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Gm18669-201ENSMUST00000216049 778 ntBASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Gm7367-201ENSMUST00000057611 492 ntBASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Atf7Q8R0S1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms