Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Treml1Q8K558 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Treml1Q8K558 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Treml1Q8K558 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Treml1Q8K558 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Treml1Q8K558 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Gm5864-201ENSMUST00000202263 970 ntBASIC15.51■□□□□ 0.07
Treml1Q8K558 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.51■□□□□ 0.07
Treml1Q8K558 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Treml1Q8K558 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.51■□□□□ 0.07
Treml1Q8K558 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Treml1Q8K558 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm8825-201ENSMUST00000182565 998 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm4518-201ENSMUST00000182638 718 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.5■□□□□ 0.07
Treml1Q8K558 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
Treml1Q8K558 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Treml1Q8K558 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Treml1Q8K558 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Treml1Q8K558 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.49■□□□□ 0.07
Treml1Q8K558 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Gm8097-201ENSMUST00000117903 829 ntBASIC15.49■□□□□ 0.07
Treml1Q8K558 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.49■□□□□ 0.07
Treml1Q8K558 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Treml1Q8K558 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.49■□□□□ 0.07
Treml1Q8K558 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Treml1Q8K558 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms