Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Gm27275-201ENSMUST00000184318 272 ntBASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ebf4Q8K4J2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Gm12933-201ENSMUST00000120203 872 ntBASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Gm10602-201ENSMUST00000098239 609 ntBASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ebf4Q8K4J2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Gm38027-201ENSMUST00000192315 235 ntBASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Gm44450-201ENSMUST00000199528 114 ntBASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ebf4Q8K4J2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Gm7791-201ENSMUST00000219066 539 ntBASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ebf4Q8K4J2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms