Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcll1Q8JZS7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.19■□□□□ 0.18
Hmgcll1Q8JZS7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcll1Q8JZS7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcll1Q8JZS7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Hmgcll1Q8JZS7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Hmgcll1Q8JZS7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcll1Q8JZS7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hmgcll1Q8JZS7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hmgcll1Q8JZS7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Gm4899-201ENSMUST00000178708 719 ntBASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Hmgcll1Q8JZS7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Gm9727-201ENSMUST00000161387 555 ntBASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgcll1Q8JZS7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcll1Q8JZS7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcll1Q8JZS7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hmgcll1Q8JZS7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcll1Q8JZS7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcll1Q8JZS7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcll1Q8JZS7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcll1Q8JZS7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgcll1Q8JZS7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.15■□□□□ 0.18
Hmgcll1Q8JZS7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms