Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Smc4Q8CG47 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.35■□□□□ 0.69
Smc4Q8CG47 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc4Q8CG47 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.34■□□□□ 0.69
Smc4Q8CG47 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.34■□□□□ 0.69
Smc4Q8CG47 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.34■□□□□ 0.69
Smc4Q8CG47 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.34■□□□□ 0.69
Smc4Q8CG47 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.34■□□□□ 0.69
Smc4Q8CG47 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc4Q8CG47 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Smc4Q8CG47 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc4Q8CG47 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc4Q8CG47 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc4Q8CG47 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Smc4Q8CG47 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc4Q8CG47 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.33■□□□□ 0.69
Smc4Q8CG47 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smc4Q8CG47 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smc4Q8CG47 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.33■□□□□ 0.68
Smc4Q8CG47 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.33■□□□□ 0.68
Smc4Q8CG47 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc4Q8CG47 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.33■□□□□ 0.68
Smc4Q8CG47 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc4Q8CG47 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc4Q8CG47 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc4Q8CG47 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc4Q8CG47 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc4Q8CG47 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Smc4Q8CG47 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc4Q8CG47 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.33■□□□□ 0.68
Smc4Q8CG47 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smc4Q8CG47 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.33■□□□□ 0.68
Smc4Q8CG47 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.32■□□□□ 0.68
Smc4Q8CG47 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Gm15467-201ENSMUST00000120582 445 ntBASIC19.32■□□□□ 0.68
Smc4Q8CG47 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Gm7787-201ENSMUST00000216858 688 ntBASIC19.32■□□□□ 0.68
Smc4Q8CG47 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.32■□□□□ 0.68
Smc4Q8CG47 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc4Q8CG47 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.31■□□□□ 0.68
Smc4Q8CG47 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Gm12260-201ENSMUST00000122447 411 ntBASIC19.31■□□□□ 0.68
Smc4Q8CG47 Gm9727-201ENSMUST00000161387 555 ntBASIC19.31■□□□□ 0.68
Smc4Q8CG47 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Gm18489-201ENSMUST00000172565 551 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms