Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc28aQ8CEI3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28aQ8CEI3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28aQ8CEI3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc28aQ8CEI3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28aQ8CEI3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc28aQ8CEI3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28aQ8CEI3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc28aQ8CEI3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Gm13559-201ENSMUST00000120476 863 ntBASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc28aQ8CEI3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Gm27011-201ENSMUST00000182352 972 ntBASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Gm37722-201ENSMUST00000193757 208 ntBASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Gm45058-201ENSMUST00000205810 766 ntBASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc28aQ8CEI3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Gm27389-201ENSMUST00000183622 195 ntBASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc28aQ8CEI3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28aQ8CEI3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28aQ8CEI3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28aQ8CEI3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28aQ8CEI3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28aQ8CEI3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28aQ8CEI3 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.6■□□□□ 0.25
Ccdc28aQ8CEI3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.6■□□□□ 0.25
Ccdc28aQ8CEI3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc28aQ8CEI3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.6■□□□□ 0.25
Ccdc28aQ8CEI3 Gm18959-201ENSMUST00000208954 655 ntBASIC16.6■□□□□ 0.25
Ccdc28aQ8CEI3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc28aQ8CEI3 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms