Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Gm12008-201ENSMUST00000117791 755 ntBASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim52Q8CDV4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Mir1895-201ENSMUST00000122615 79 ntBASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Gm8396-201ENSMUST00000057361 823 ntBASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim52Q8CDV4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim52Q8CDV4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim52Q8CDV4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Trim52Q8CDV4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim52Q8CDV4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim52Q8CDV4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim52Q8CDV4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim52Q8CDV4 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.33■□□□□ 0.68
Trim52Q8CDV4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim52Q8CDV4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim52Q8CDV4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim52Q8CDV4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.33■□□□□ 0.68
Trim52Q8CDV4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim52Q8CDV4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim52Q8CDV4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim52Q8CDV4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim52Q8CDV4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim52Q8CDV4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim52Q8CDV4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Gm10499-201ENSMUST00000174094 934 ntBASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Gm20553-201ENSMUST00000204205 844 ntBASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim52Q8CDV4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms