Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lysmd4Q8CC84 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lysmd4Q8CC84 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Gm27011-201ENSMUST00000182352 972 ntBASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.13□□□□□ -0.15
Lysmd4Q8CC84 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Gm2274-201ENSMUST00000184539 609 ntBASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Gm5417-201ENSMUST00000079706 384 ntBASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lysmd4Q8CC84 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.11□□□□□ -0.15
Lysmd4Q8CC84 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms