Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Gm12644-201ENSMUST00000119935 606 ntBASIC15.24■□□□□ 0.03
SynpoQ8CC35 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.24■□□□□ 0.03
SynpoQ8CC35 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SynpoQ8CC35 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.24■□□□□ 0.03
SynpoQ8CC35 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SynpoQ8CC35 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.23■□□□□ 0.03
SynpoQ8CC35 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.23■□□□□ 0.03
SynpoQ8CC35 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SynpoQ8CC35 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.22■□□□□ 0.03
SynpoQ8CC35 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Sybu-209ENSMUST00000228639 4113 ntBASIC15.22■□□□□ 0.03
SynpoQ8CC35 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SynpoQ8CC35 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SynpoQ8CC35 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.21■□□□□ 0.03
SynpoQ8CC35 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.21■□□□□ 0.03
SynpoQ8CC35 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SynpoQ8CC35 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SynpoQ8CC35 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
SynpoQ8CC35 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SynpoQ8CC35 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.2■□□□□ 0.02
SynpoQ8CC35 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SynpoQ8CC35 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SynpoQ8CC35 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SynpoQ8CC35 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SynpoQ8CC35 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SynpoQ8CC35 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SynpoQ8CC35 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SynpoQ8CC35 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SynpoQ8CC35 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms