Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Gm29518-201ENSMUST00000190858 372 ntBASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Gm17808-201ENSMUST00000200859 894 ntBASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Aph1bQ8C7N7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Aph1bQ8C7N7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Aph1bQ8C7N7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Aph1bQ8C7N7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Aph1bQ8C7N7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Aph1bQ8C7N7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Aph1bQ8C7N7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Aph1bQ8C7N7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.58■□□□□ 0.09
Aph1bQ8C7N7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Gm25406-201ENSMUST00000157599 105 ntBASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Gm7367-201ENSMUST00000057611 492 ntBASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Aph1bQ8C7N7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Gm45328-201ENSMUST00000210942 917 ntBASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.57■□□□□ 0.08
Aph1bQ8C7N7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Gm13312-201ENSMUST00000119631 718 ntBASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Aph1bQ8C7N7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Aph1bQ8C7N7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms