Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Asic1-205ENSMUST00000228185 1818 ntBASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Gm12497-201ENSMUST00000138778 237 ntBASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim9Q8C7M3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Gm21362-201ENSMUST00000194272 928 ntBASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim9Q8C7M3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim9Q8C7M3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Trim9Q8C7M3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Trim9Q8C7M3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms