Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Mir6982-201ENSMUST00000184354 68 ntBASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smim4Q8C1Q6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Gm10013-201ENSMUST00000106074 672 ntBASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smim4Q8C1Q6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smim4Q8C1Q6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Smim4Q8C1Q6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smim4Q8C1Q6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smim4Q8C1Q6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Smim4Q8C1Q6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Smim4Q8C1Q6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smim4Q8C1Q6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 App-207ENSMUST00000227737 2827 ntBASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Gm18032-201ENSMUST00000222541 538 ntBASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smim4Q8C1Q6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.19□□□□□ -0.3
Smim4Q8C1Q6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms