Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.23■□□□□ 0.19
Trub1Q8C0D0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.23■□□□□ 0.19
Trub1Q8C0D0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Gm7506-201ENSMUST00000207758 815 ntBASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.22■□□□□ 0.19
Trub1Q8C0D0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Ank2-226ENSMUST00000189368 339 ntBASIC16.21■□□□□ 0.19
Trub1Q8C0D0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Trub1Q8C0D0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trub1Q8C0D0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms