Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Gm4899-201ENSMUST00000178708 719 ntBASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Sh3rf2Q8BZT2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Gm4995-201ENSMUST00000117247 432 ntBASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Gm27702-201ENSMUST00000184512 56 ntBASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Grk6-207ENSMUST00000225925 2769 ntBASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh3rf2Q8BZT2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh3rf2Q8BZT2 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sh3rf2Q8BZT2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms