Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cpsf4Q8BQZ5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Gm17971-201ENSMUST00000190239 806 ntBASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cpsf4Q8BQZ5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf4Q8BQZ5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4Q8BQZ5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4Q8BQZ5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4Q8BQZ5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4Q8BQZ5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4Q8BQZ5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4Q8BQZ5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4Q8BQZ5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4Q8BQZ5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf4Q8BQZ5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.27■□□□□ 0.04
Cpsf4Q8BQZ5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.27■□□□□ 0.04
Cpsf4Q8BQZ5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cpsf4Q8BQZ5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4Q8BQZ5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4Q8BQZ5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cpsf4Q8BQZ5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4Q8BQZ5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cpsf4Q8BQZ5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4Q8BQZ5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4Q8BQZ5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4Q8BQZ5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf4Q8BQZ5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf4Q8BQZ5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms