Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Gm2423-201ENSMUST00000074863 733 ntBASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col16a1Q8BLX7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Gm6973-201ENSMUST00000117080 721 ntBASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Gm12017-201ENSMUST00000122453 1003 ntBASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Gm10154-201ENSMUST00000084445 354 ntBASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col16a1Q8BLX7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.48■□□□□ 0.87
Col16a1Q8BLX7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col16a1Q8BLX7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Gm7901-201ENSMUST00000120430 1597 ntBASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col16a1Q8BLX7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Col16a1Q8BLX7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col16a1Q8BLX7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col16a1Q8BLX7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Col16a1Q8BLX7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col16a1Q8BLX7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Col16a1Q8BLX7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col16a1Q8BLX7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Col16a1Q8BLX7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Col16a1Q8BLX7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Col16a1Q8BLX7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col16a1Q8BLX7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Col16a1Q8BLX7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col16a1Q8BLX7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC20.44■□□□□ 0.86
Col16a1Q8BLX7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Col16a1Q8BLX7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC20.44■□□□□ 0.86
Col16a1Q8BLX7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col16a1Q8BLX7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col16a1Q8BLX7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC20.44■□□□□ 0.86
Col16a1Q8BLX7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col16a1Q8BLX7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.44■□□□□ 0.86
Col16a1Q8BLX7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col16a1Q8BLX7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Col16a1Q8BLX7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms