Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trpa1Q8BLA8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Gm15372-201ENSMUST00000120729 834 ntBASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Gm27741-201ENSMUST00000185060 237 ntBASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trpa1Q8BLA8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trpa1Q8BLA8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Gm7153-201ENSMUST00000117092 455 ntBASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Gm12644-201ENSMUST00000119935 606 ntBASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trpa1Q8BLA8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trpa1Q8BLA8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trpa1Q8BLA8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms