Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdhr3Q8BL00 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cdhr3Q8BL00 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cdhr3Q8BL00 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cdhr3Q8BL00 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.77□□□□□ -0.2
Cdhr3Q8BL00 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cdhr3Q8BL00 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdhr3Q8BL00 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Gm11355-201ENSMUST00000121120 306 ntBASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdhr3Q8BL00 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdhr3Q8BL00 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Gm22697-201ENSMUST00000175194 63 ntBASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Mir6404-201ENSMUST00000183699 94 ntBASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Cdhr3Q8BL00 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms