Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Gm10052-201ENSMUST00000168019 960 ntBASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Gm7729-201ENSMUST00000050143 801 ntBASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp2bQ8BJF9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.14■□□□□ 0.18
Chmp2bQ8BJF9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Gm22697-201ENSMUST00000175194 63 ntBASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.14■□□□□ 0.17
Chmp2bQ8BJF9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chmp2bQ8BJF9 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Gm44430-201ENSMUST00000203376 995 ntBASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms