Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Gm18421-201ENSMUST00000204122 625 ntBASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Scn3bQ8BHK2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Scn3bQ8BHK2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Scn3bQ8BHK2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn3bQ8BHK2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.64□□□□□ -0.07
Scn3bQ8BHK2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn3bQ8BHK2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Scn3bQ8BHK2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Scn3bQ8BHK2 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.64□□□□□ -0.07
Scn3bQ8BHK2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms