Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Krr1Q8BGA5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Krr1Q8BGA5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.94□□□□□ -0.02
Krr1Q8BGA5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Krr1Q8BGA5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Krr1Q8BGA5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Krr1Q8BGA5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Krr1Q8BGA5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Krr1Q8BGA5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Krr1Q8BGA5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Krr1Q8BGA5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Gm6433-201ENSMUST00000118634 875 ntBASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Gm27389-201ENSMUST00000183622 195 ntBASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Krr1Q8BGA5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Krr1Q8BGA5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Krr1Q8BGA5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms