Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC20.13■□□□□ 0.81
Shank2Q80Z38 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Syt7-204ENSMUST00000223586 1344 ntBASIC20.13■□□□□ 0.81
Shank2Q80Z38 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.13■□□□□ 0.81
Shank2Q80Z38 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Shank2Q80Z38 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Gm14767-201ENSMUST00000121559 586 ntBASIC20.12■□□□□ 0.81
Shank2Q80Z38 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Shank2Q80Z38 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Shank2Q80Z38 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.11■□□□□ 0.81
Shank2Q80Z38 Gm8318-201ENSMUST00000182954 872 ntBASIC20.11■□□□□ 0.81
Shank2Q80Z38 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC20.11■□□□□ 0.81
Shank2Q80Z38 AC124732.1-201ENSMUST00000221551 910 ntBASIC20.11■□□□□ 0.81
Shank2Q80Z38 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.11■□□□□ 0.81
Shank2Q80Z38 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank2Q80Z38 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Shank2Q80Z38 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank2Q80Z38 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank2Q80Z38 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC20.11■□□□□ 0.81
Shank2Q80Z38 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC20.11■□□□□ 0.81
Shank2Q80Z38 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Shank2Q80Z38 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC20.11■□□□□ 0.81
Shank2Q80Z38 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC20.11■□□□□ 0.81
Shank2Q80Z38 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank2Q80Z38 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank2Q80Z38 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank2Q80Z38 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Shank2Q80Z38 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Shank2Q80Z38 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Gm25857-201ENSMUST00000082788 129 ntBASIC20.1■□□□□ 0.81
Shank2Q80Z38 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Shank2Q80Z38 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC20.09■□□□□ 0.81
Shank2Q80Z38 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank2Q80Z38 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank2Q80Z38 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shank2Q80Z38 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank2Q80Z38 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank2Q80Z38 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Shank2Q80Z38 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Shank2Q80Z38 Gm6912-201ENSMUST00000117218 544 ntBASIC20.09■□□□□ 0.81
Shank2Q80Z38 Gm8410-201ENSMUST00000117225 605 ntBASIC20.09■□□□□ 0.81
Shank2Q80Z38 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC20.09■□□□□ 0.81
Shank2Q80Z38 Gm24694-201ENSMUST00000180054 110 ntBASIC20.09■□□□□ 0.81
Shank2Q80Z38 Gm27663-201ENSMUST00000184839 110 ntBASIC20.09■□□□□ 0.81
Shank2Q80Z38 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Shank2Q80Z38 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Shank2Q80Z38 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms