Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Prpf40bQ80W14 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Prpf40bQ80W14 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Prpf40bQ80W14 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Prpf40bQ80W14 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Prpf40bQ80W14 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Prpf40bQ80W14 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 Gm4459-201ENSMUST00000118750 468 ntBASIC18.14■□□□□ 0.49
Prpf40bQ80W14 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Prpf40bQ80W14 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Gm12497-201ENSMUST00000138778 237 ntBASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Gm27321-201ENSMUST00000185021 205 ntBASIC18.13■□□□□ 0.49
Prpf40bQ80W14 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.13■□□□□ 0.49
Prpf40bQ80W14 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Prpf40bQ80W14 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Prpf40bQ80W14 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Gm11025-201ENSMUST00000140773 466 ntBASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Prpf40bQ80W14 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.1■□□□□ 0.49
Prpf40bQ80W14 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Prpf40bQ80W14 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms