Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3tc2Q80VA5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.13■□□□□ 0.33
Sh3tc2Q80VA5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3tc2Q80VA5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh3tc2Q80VA5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Gm14057-201ENSMUST00000120631 482 ntBASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sh3tc2Q80VA5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Gm15920-201ENSMUST00000118998 402 ntBASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Gm27646-201ENSMUST00000183989 110 ntBASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sh3tc2Q80VA5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Gm14701-201ENSMUST00000117156 348 ntBASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Gm5682-201ENSMUST00000173402 505 ntBASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sh3tc2Q80VA5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3tc2Q80VA5 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3tc2Q80VA5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3tc2Q80VA5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3tc2Q80VA5 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3tc2Q80VA5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Sh3tc2Q80VA5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3tc2Q80VA5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms