Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Gm8969-201ENSMUST00000199694 526 ntBASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Asic1-205ENSMUST00000228185 1818 ntBASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.47□□□□□ -0.25
Ubr5Q80TP3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubr5Q80TP3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ubr5Q80TP3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.46□□□□□ -0.25
Ubr5Q80TP3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Ubr5Q80TP3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ubr5Q80TP3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.46□□□□□ -0.25
Ubr5Q80TP3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ubr5Q80TP3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ubr5Q80TP3 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.46□□□□□ -0.25
Ubr5Q80TP3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubr5Q80TP3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ubr5Q80TP3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ubr5Q80TP3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Ubr5Q80TP3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.46□□□□□ -0.26
Ubr5Q80TP3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ubr5Q80TP3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ubr5Q80TP3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ubr5Q80TP3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Ubr5Q80TP3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ubr5Q80TP3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Ubr5Q80TP3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Gm14042-201ENSMUST00000120139 833 ntBASIC13.45□□□□□ -0.26
Ubr5Q80TP3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr5Q80TP3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Gm8318-201ENSMUST00000182954 872 ntBASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Gm11543-201ENSMUST00000120758 370 ntBASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr5Q80TP3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms