Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Csmd3Q80T79 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Csmd3Q80T79 AC121598.2-201ENSMUST00000228376 2325 ntBASIC10.68□□□□□ -0.7
Csmd3Q80T79 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Gm15321-201ENSMUST00000121290 288 ntBASIC10.68□□□□□ -0.7
Csmd3Q80T79 Gm27989-201ENSMUST00000184721 107 ntBASIC10.68□□□□□ -0.7
Csmd3Q80T79 Gm9063-201ENSMUST00000223299 582 ntBASIC10.68□□□□□ -0.7
Csmd3Q80T79 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Gm15635-204ENSMUST00000208024 2539 ntBASIC10.68□□□□□ -0.7
Csmd3Q80T79 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Gm24158-201ENSMUST00000175263 71 ntBASIC10.68□□□□□ -0.7
Csmd3Q80T79 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Csmd3Q80T79 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC10.67□□□□□ -0.7
Csmd3Q80T79 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC10.67□□□□□ -0.7
Csmd3Q80T79 Gm10154-201ENSMUST00000084445 354 ntBASIC10.67□□□□□ -0.7
Csmd3Q80T79 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.67□□□□□ -0.7
Csmd3Q80T79 AC154231.1-201ENSMUST00000220564 2175 ntBASIC10.67□□□□□ -0.7
Csmd3Q80T79 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Gm25144-201ENSMUST00000179561 110 ntBASIC10.67□□□□□ -0.7
Csmd3Q80T79 Gm25352-201ENSMUST00000179815 110 ntBASIC10.67□□□□□ -0.7
Csmd3Q80T79 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Csmd3Q80T79 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Csmd3Q80T79 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Csmd3Q80T79 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Csmd3Q80T79 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Csmd3Q80T79 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Csmd3Q80T79 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Csmd3Q80T79 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Csmd3Q80T79 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Csmd3Q80T79 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Csmd3Q80T79 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.66□□□□□ -0.7
Csmd3Q80T79 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Csmd3Q80T79 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Csmd3Q80T79 Mir8102-201ENSMUST00000184148 139 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms