Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.51□□□□□ -0.09
Pif1Q80SX8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Pif1Q80SX8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pif1Q80SX8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.49□□□□□ -0.09
Pif1Q80SX8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Gm11764-201ENSMUST00000120221 623 ntBASIC14.49□□□□□ -0.09
Pif1Q80SX8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Mir3113-201ENSMUST00000175478 76 ntBASIC14.49□□□□□ -0.09
Pif1Q80SX8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.49□□□□□ -0.09
Pif1Q80SX8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pif1Q80SX8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.48□□□□□ -0.09
Pif1Q80SX8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.48□□□□□ -0.09
Pif1Q80SX8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.48□□□□□ -0.09
Pif1Q80SX8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.48□□□□□ -0.09
Pif1Q80SX8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pif1Q80SX8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms