Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Gm24158-201ENSMUST00000175263 71 ntBASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Gm29541-201ENSMUST00000191351 678 ntBASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.53■□□□□ 0.56
Nup188Q6ZQH8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup188Q6ZQH8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nup188Q6ZQH8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup188Q6ZQH8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup188Q6ZQH8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup188Q6ZQH8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.52■□□□□ 0.56
Nup188Q6ZQH8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nup188Q6ZQH8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nup188Q6ZQH8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.52■□□□□ 0.55
Nup188Q6ZQH8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.52■□□□□ 0.55
Nup188Q6ZQH8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Nup188Q6ZQH8 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.52■□□□□ 0.55
Nup188Q6ZQH8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nup188Q6ZQH8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nup188Q6ZQH8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Gm14127-201ENSMUST00000117906 678 ntBASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Gm12151-201ENSMUST00000121374 290 ntBASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Gm5779-201ENSMUST00000218467 910 ntBASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nup188Q6ZQH8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nup188Q6ZQH8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Nup188Q6ZQH8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nup188Q6ZQH8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nup188Q6ZQH8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nup188Q6ZQH8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nup188Q6ZQH8 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.49■□□□□ 0.55
Nup188Q6ZQH8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nup188Q6ZQH8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nup188Q6ZQH8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.49■□□□□ 0.55
Nup188Q6ZQH8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms