Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rif1Q6PR54 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rif1Q6PR54 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rif1Q6PR54 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rif1Q6PR54 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rif1Q6PR54 Gm15358-201ENSMUST00000119249 520 ntBASIC13.24□□□□□ -0.29
Rif1Q6PR54 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rif1Q6PR54 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rif1Q6PR54 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rif1Q6PR54 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rif1Q6PR54 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rif1Q6PR54 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.24□□□□□ -0.29
Rif1Q6PR54 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.24□□□□□ -0.29
Rif1Q6PR54 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rif1Q6PR54 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Gm27892-201ENSMUST00000185017 106 ntBASIC13.23□□□□□ -0.29
Rif1Q6PR54 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.23□□□□□ -0.29
Rif1Q6PR54 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rif1Q6PR54 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Rif1Q6PR54 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.22□□□□□ -0.29
Rif1Q6PR54 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Gm10478-201ENSMUST00000084451 396 ntBASIC13.22□□□□□ -0.29
Rif1Q6PR54 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.22□□□□□ -0.29
Rif1Q6PR54 Gm45668-201ENSMUST00000211271 493 ntBASIC13.22□□□□□ -0.29
Rif1Q6PR54 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.22□□□□□ -0.29
Rif1Q6PR54 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.22□□□□□ -0.29
Rif1Q6PR54 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC13.22□□□□□ -0.29
Rif1Q6PR54 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Gm14767-201ENSMUST00000121559 586 ntBASIC13.21□□□□□ -0.29
Rif1Q6PR54 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rif1Q6PR54 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.21□□□□□ -0.3
Rif1Q6PR54 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rif1Q6PR54 Gm2810-201ENSMUST00000118681 990 ntBASIC13.21□□□□□ -0.3
Rif1Q6PR54 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.21□□□□□ -0.3
Rif1Q6PR54 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.21□□□□□ -0.3
Rif1Q6PR54 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rif1Q6PR54 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.21□□□□□ -0.3
Rif1Q6PR54 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
Rif1Q6PR54 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rif1Q6PR54 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Rif1Q6PR54 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rif1Q6PR54 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rif1Q6PR54 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rif1Q6PR54 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms