Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sdc3Q64519 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sdc3Q64519 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sdc3Q64519 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sdc3Q64519 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.13■□□□□ 0.01
Sdc3Q64519 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Sdc3Q64519 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Sdc3Q64519 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Sdc3Q64519 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.12■□□□□ 0.01
Sdc3Q64519 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Sdc3Q64519 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sdc3Q64519 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sdc3Q64519 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Sdc3Q64519 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Sdc3Q64519 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.11■□□□□ 0.01
Sdc3Q64519 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sdc3Q64519 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.11■□□□□ 0.01
Sdc3Q64519 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.11■□□□□ 0.01
Sdc3Q64519 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sdc3Q64519 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.11■□□□□ 0.01
Sdc3Q64519 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.11■□□□□ 0.01
Sdc3Q64519 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Gm4459-201ENSMUST00000118750 468 ntBASIC15.1■□□□□ 0.01
Sdc3Q64519 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.1■□□□□ 0.01
Sdc3Q64519 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.1■□□□□ 0.01
Sdc3Q64519 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sdc3Q64519 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.1■□□□□ 0.01
Sdc3Q64519 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sdc3Q64519 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Sdc3Q64519 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sdc3Q64519 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.09■□□□□ 0.01
Sdc3Q64519 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sdc3Q64519 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sdc3Q64519 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sdc3Q64519 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.09■□□□□ 0.01
Sdc3Q64519 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sdc3Q64519 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sdc3Q64519 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sdc3Q64519 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Sdc3Q64519 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.09■□□□□ 0.01
Sdc3Q64519 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.09■□□□□ 0.01
Sdc3Q64519 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.09■□□□□ 0.01
Sdc3Q64519 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Sdc3Q64519 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sdc3Q64519 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sdc3Q64519 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sdc3Q64519 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sdc3Q64519 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sdc3Q64519 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sdc3Q64519 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.09■□□□□ 0.01
Sdc3Q64519 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.09■□□□□ 0.01
Sdc3Q64519 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sdc3Q64519 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sdc3Q64519 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sdc3Q64519 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sdc3Q64519 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms