Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.41■□□□□ 0.06
Six3Q62233 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Six3Q62233 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.41■□□□□ 0.06
Six3Q62233 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.41■□□□□ 0.06
Six3Q62233 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.41■□□□□ 0.06
Six3Q62233 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.41■□□□□ 0.06
Six3Q62233 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Sybu-209ENSMUST00000228639 4113 ntBASIC15.41■□□□□ 0.06
Six3Q62233 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Six3Q62233 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Six3Q62233 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Six3Q62233 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Six3Q62233 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.4■□□□□ 0.06
Six3Q62233 Gm23634-201ENSMUST00000175071 91 ntBASIC15.4■□□□□ 0.06
Six3Q62233 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Six3Q62233 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
Six3Q62233 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.4■□□□□ 0.06
Six3Q62233 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.4■□□□□ 0.06
Six3Q62233 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.4■□□□□ 0.06
Six3Q62233 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Six3Q62233 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Six3Q62233 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.39■□□□□ 0.06
Six3Q62233 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.06
Six3Q62233 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.39■□□□□ 0.05
Six3Q62233 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Gm15794-201ENSMUST00000120182 631 ntBASIC15.39■□□□□ 0.05
Six3Q62233 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.39■□□□□ 0.05
Six3Q62233 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Six3Q62233 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Six3Q62233 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Six3Q62233 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Six3Q62233 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.39■□□□□ 0.05
Six3Q62233 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.39■□□□□ 0.05
Six3Q62233 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.39■□□□□ 0.05
Six3Q62233 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.39■□□□□ 0.05
Six3Q62233 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Six3Q62233 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Six3Q62233 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Six3Q62233 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Six3Q62233 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Six3Q62233 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Six3Q62233 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Six3Q62233 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.38■□□□□ 0.05
Six3Q62233 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Six3Q62233 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms