Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn9aQ62205 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn9aQ62205 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn9aQ62205 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn9aQ62205 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.39■□□□□ 0.53
Scn9aQ62205 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn9aQ62205 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Scn9aQ62205 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.39■□□□□ 0.53
Scn9aQ62205 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.39■□□□□ 0.53
Scn9aQ62205 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn9aQ62205 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Scn9aQ62205 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Scn9aQ62205 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC18.38■□□□□ 0.53
Scn9aQ62205 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.38■□□□□ 0.53
Scn9aQ62205 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.38■□□□□ 0.53
Scn9aQ62205 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 Mir8102-201ENSMUST00000184148 139 ntBASIC18.38■□□□□ 0.53
Scn9aQ62205 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.38■□□□□ 0.53
Scn9aQ62205 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Scn9aQ62205 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Scn9aQ62205 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scn9aQ62205 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Scn9aQ62205 Gm6415-201ENSMUST00000118488 348 ntBASIC18.37■□□□□ 0.53
Scn9aQ62205 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.37■□□□□ 0.53
Scn9aQ62205 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Scn9aQ62205 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scn9aQ62205 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scn9aQ62205 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.37■□□□□ 0.53
Scn9aQ62205 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.37■□□□□ 0.53
Scn9aQ62205 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scn9aQ62205 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn9aQ62205 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.37■□□□□ 0.53
Scn9aQ62205 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn9aQ62205 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Scn9aQ62205 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.36■□□□□ 0.53
Scn9aQ62205 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn9aQ62205 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn9aQ62205 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn9aQ62205 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.36■□□□□ 0.53
Scn9aQ62205 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Scn9aQ62205 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn9aQ62205 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.36■□□□□ 0.53
Scn9aQ62205 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn9aQ62205 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn9aQ62205 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn9aQ62205 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.36■□□□□ 0.53
Scn9aQ62205 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn9aQ62205 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn9aQ62205 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn9aQ62205 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Scn9aQ62205 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Scn9aQ62205 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Scn9aQ62205 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 Gm7488-201ENSMUST00000117148 684 ntBASIC18.35■□□□□ 0.53
Scn9aQ62205 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.35■□□□□ 0.53
Scn9aQ62205 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.35■□□□□ 0.53
Scn9aQ62205 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn9aQ62205 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn9aQ62205 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn9aQ62205 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn9aQ62205 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn9aQ62205 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms