Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sox17Q61473 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox17Q61473 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox17Q61473 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.81□□□□□ -0.04
Sox17Q61473 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Sox17Q61473 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Sox17Q61473 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sox17Q61473 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Sox17Q61473 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sox17Q61473 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox17Q61473 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sox17Q61473 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Sox17Q61473 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox17Q61473 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sox17Q61473 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox17Q61473 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox17Q61473 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox17Q61473 Gm11336-201ENSMUST00000118168 334 ntBASIC14.79□□□□□ -0.04
Sox17Q61473 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sox17Q61473 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sox17Q61473 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox17Q61473 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.79□□□□□ -0.04
Sox17Q61473 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox17Q61473 Efs-202ENSMUST00000227037 2540 ntBASIC14.79□□□□□ -0.04
Sox17Q61473 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox17Q61473 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Sox17Q61473 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox17Q61473 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Sox17Q61473 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox17Q61473 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox17Q61473 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.78□□□□□ -0.04
Sox17Q61473 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Sox17Q61473 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sox17Q61473 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.78□□□□□ -0.04
Sox17Q61473 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox17Q61473 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Sox17Q61473 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms