Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Gm43125-201ENSMUST00000201724 730 ntBASIC15.34■□□□□ 0.05
Sim2Q61079 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.34■□□□□ 0.05
Sim2Q61079 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.34■□□□□ 0.05
Sim2Q61079 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sim2Q61079 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sim2Q61079 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sim2Q61079 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sim2Q61079 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Sim2Q61079 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sim2Q61079 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sim2Q61079 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sim2Q61079 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sim2Q61079 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sim2Q61079 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sim2Q61079 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Sim2Q61079 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sim2Q61079 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sim2Q61079 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sim2Q61079 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.33■□□□□ 0.04
Sim2Q61079 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.33■□□□□ 0.04
Sim2Q61079 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sim2Q61079 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sim2Q61079 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sim2Q61079 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.33■□□□□ 0.04
Sim2Q61079 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.33■□□□□ 0.04
Sim2Q61079 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sim2Q61079 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sim2Q61079 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.33■□□□□ 0.04
Sim2Q61079 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sim2Q61079 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.33■□□□□ 0.04
Sim2Q61079 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sim2Q61079 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sim2Q61079 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sim2Q61079 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.33■□□□□ 0.04
Sim2Q61079 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sim2Q61079 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sim2Q61079 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Gm12428-201ENSMUST00000119844 727 ntBASIC15.32■□□□□ 0.04
Sim2Q61079 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Gm23547-201ENSMUST00000158210 271 ntBASIC15.32■□□□□ 0.04
Sim2Q61079 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.32■□□□□ 0.04
Sim2Q61079 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.32■□□□□ 0.04
Sim2Q61079 Gm19164-201ENSMUST00000210667 640 ntBASIC15.32■□□□□ 0.04
Sim2Q61079 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sim2Q61079 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.32■□□□□ 0.04
Sim2Q61079 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Sim2Q61079 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sim2Q61079 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Sim2Q61079 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Gm11424-201ENSMUST00000121929 829 ntBASIC15.31■□□□□ 0.04
Sim2Q61079 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Gm7774-201ENSMUST00000200064 533 ntBASIC15.31■□□□□ 0.04
Sim2Q61079 Thap2-203ENSMUST00000218989 527 ntBASIC15.31■□□□□ 0.04
Sim2Q61079 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sim2Q61079 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Sim2Q61079 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Sim2Q61079 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.31■□□□□ 0.04
Sim2Q61079 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Sim2Q61079 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sim2Q61079 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sim2Q61079 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sim2Q61079 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sim2Q61079 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sim2Q61079 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Sim2Q61079 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sim2Q61079 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sim2Q61079 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sim2Q61079 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sim2Q61079 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sim2Q61079 Gm27622-201ENSMUST00000183779 60 ntBASIC15.3■□□□□ 0.04
Sim2Q61079 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sim2Q61079 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.3■□□□□ 0.04
Sim2Q61079 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sim2Q61079 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms