Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc6a4Q60857 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.09■□□□□ 0.17
Slc6a4Q60857 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.09■□□□□ 0.17
Slc6a4Q60857 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.09■□□□□ 0.17
Slc6a4Q60857 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc6a4Q60857 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.09■□□□□ 0.17
Slc6a4Q60857 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a4Q60857 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a4Q60857 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a4Q60857 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a4Q60857 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a4Q60857 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a4Q60857 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc6a4Q60857 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Gm11779-201ENSMUST00000118541 368 ntBASIC16.08■□□□□ 0.16
Slc6a4Q60857 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Gm14140-201ENSMUST00000119999 995 ntBASIC16.08■□□□□ 0.16
Slc6a4Q60857 Gm11764-201ENSMUST00000120221 623 ntBASIC16.08■□□□□ 0.16
Slc6a4Q60857 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Gm37153-201ENSMUST00000193637 231 ntBASIC16.08■□□□□ 0.16
Slc6a4Q60857 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.08■□□□□ 0.16
Slc6a4Q60857 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.08■□□□□ 0.16
Slc6a4Q60857 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.08■□□□□ 0.16
Slc6a4Q60857 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Slc6a4Q60857 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.07■□□□□ 0.16
Slc6a4Q60857 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.07■□□□□ 0.16
Slc6a4Q60857 Gm45167-201ENSMUST00000208007 322 ntBASIC16.07■□□□□ 0.16
Slc6a4Q60857 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.07■□□□□ 0.16
Slc6a4Q60857 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Slc6a4Q60857 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms