Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ccdc85aQ5SP85 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc85aQ5SP85 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc85aQ5SP85 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 Rprl2-201ENSMUST00000157150 290 ntBASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc85aQ5SP85 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Gm18889-201ENSMUST00000174284 929 ntBASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Gm22175-201ENSMUST00000175007 78 ntBASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Gm5745-201ENSMUST00000183748 313 ntBASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Gm43125-201ENSMUST00000201724 730 ntBASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc85aQ5SP85 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc85aQ5SP85 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85aQ5SP85 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85aQ5SP85 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85aQ5SP85 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85aQ5SP85 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc85aQ5SP85 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85aQ5SP85 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc85aQ5SP85 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms