Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Gm7222-201ENSMUST00000117512 906 ntBASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Gm6089-201ENSMUST00000197666 938 ntBASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Gm18206-201ENSMUST00000207027 926 ntBASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav2Q5R1I9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Gm11780-201ENSMUST00000136880 516 ntBASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Mir5126-201ENSMUST00000175513 77 ntBASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Gm18622-201ENSMUST00000219361 595 ntBASIC12.56□□□□□ -0.4
Trav2Q5R1I9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav2Q5R1I9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Gm8344-201ENSMUST00000119813 856 ntBASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Gm6257-201ENSMUST00000163864 910 ntBASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Gm6550-201ENSMUST00000187574 993 ntBASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav2Q5R1I9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms