Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-2Q5R1I4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Gm13216-201ENSMUST00000117145 591 ntBASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav6-2Q5R1I4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6-2Q5R1I4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms