Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Mir6982-201ENSMUST00000184354 68 ntBASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav6-3Q5R1E6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Gm5587-201ENSMUST00000206270 674 ntBASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-3Q5R1E6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Gm10252-201ENSMUST00000209541 832 ntBASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms