Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8d-2Q5R1B6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Gm25287-201ENSMUST00000103846 110 ntBASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Gm22918-201ENSMUST00000103855 110 ntBASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Gm9385-201ENSMUST00000117563 472 ntBASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8d-2Q5R1B6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Gm16198-201ENSMUST00000118766 670 ntBASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Gm2272-201ENSMUST00000194903 582 ntBASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8d-2Q5R1B6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.27■□□□□ 0.03
Trav8d-2Q5R1B6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav8d-2Q5R1B6 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.27■□□□□ 0.03
Trav8d-2Q5R1B6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8d-2Q5R1B6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8d-2Q5R1B6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8d-2Q5R1B6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8d-2Q5R1B6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8d-2Q5R1B6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Grk6-207ENSMUST00000225925 2769 ntBASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Gm27437-201ENSMUST00000183429 107 ntBASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav8d-2Q5R1B6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8d-2Q5R1B6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms