Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf20Q5DTM8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf20Q5DTM8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf20Q5DTM8 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Gm15372-201ENSMUST00000120729 834 ntBASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf20Q5DTM8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf20Q5DTM8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rnf20Q5DTM8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rnf20Q5DTM8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms