Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.46■□□□□ 0.71
Usp48Q3V0C5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Usp48Q3V0C5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Gm27321-201ENSMUST00000185021 205 ntBASIC19.45■□□□□ 0.7
Usp48Q3V0C5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp48Q3V0C5 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp48Q3V0C5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Mir6956-201ENSMUST00000183598 62 ntBASIC19.43■□□□□ 0.7
Usp48Q3V0C5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp48Q3V0C5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp48Q3V0C5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms