Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nr1d1Q3UV55 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Nr1d1Q3UV55 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nr1d1Q3UV55 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Nr1d1Q3UV55 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nr1d1Q3UV55 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Gm25016-201ENSMUST00000158399 131 ntBASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Actl10-202ENSMUST00000226583 1501 ntBASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Nr1d1Q3UV55 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nr1d1Q3UV55 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nr1d1Q3UV55 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Nr1d1Q3UV55 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nr1d1Q3UV55 BC037039-201ENSMUST00000192003 2205 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms